miRBase entry: aae-mir-263b

Stem-loop aae-mir-263b


Accession
MI0013515
Description
Aedes aegypti aae-mir-263b precursor miRNA

Literature search
2 open access papers mention aae-mir-263b
(3 sentences)

Sequence

4830 reads, 244 reads per million, 2 experiments
gaccaauuacgaacCUUGGCACUGGGAGAAUUCACAGgcgcuauuugcuaucauucugUGGAUCUUUUCGUGCCAUCGUuuaaauucgguc
((((((((..((((..((((((.((((((.((((((((.((.....))......)))))))))))))).))))))..)))).)))).))))

Structure
    -    ac    CU      U      A        -----c  u 
gacc aauu  gaac  UGGCAC GGGAGA UUCACAGg      gc a
|||| ||||  ||||  |||||| |||||| ||||||||      || u
cugg uuaa  uuUG  ACCGUG UUUUCU AGGUgucu      cg u
    c    -a    CU      C      -        uacuau  u 


Annotation confidence High
Do you think this miRNA is real?

Genome context
supercont1.28: 2323832-2323922 [+]

Database links

Mature aae-miR-263b-5p

Accession MIMAT0014309
Description Aedes aegypti aae-miR-263b-5p mature miRNA
Sequence 15 - CUUGGCACUGGGAGAAUUCACAG - 37
Evidence experimental
454 [1]

Mature aae-miR-263b-3p

Accession MIMAT0014310
Description Aedes aegypti aae-miR-263b-3p mature miRNA
Sequence 59 - UGGAUCUUUUCGUGCCAUCGU - 79
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581