Stem-loop aae-mir-193

Accession

MI0013511

Description

Aedes aegypti aae-mir-193 precursor miRNA

Sequence

5492 reads, 56.0 reads per million, 79 experiments

gcuugcuauguaauuuuuucaaucgaacUGGGAUUUUGUGGACCAGAAGauuuccuccauucgauaauagcUACUGGCCUACUAAGUCCCAACuuguuuggaaauuguccgacagauagcaagc
(((((((((((....(((((((.(((..((((((((.((((.((((.((......((.....))......)).)))).)))).))))))))..))).))))))).......)))..))))))))

Structure

        --   ---aauu       u   ac        U    A    A  auuucc  c 
gcuugcua  ugu       uuuucaa cga  UGGGAUUU GUGG CCAG AG      uc a
||||||||  |||       ||||||| |||  |||||||| |||| |||| ||      || u
cgaacgau  aca       aaagguu guu  ACCCUGAA CAUC GGUC Uc      ag u
        ag   gccuguu       u   CA        U    C    A  gauaau  c 

Annotation confidence High

Genome context

ref|NW_001811262.1|: 717066-717189 [+]

Mature aae-miR-193-5p

• Accession: MIMAT0057358
• Description: Aedes aegypti aae-miR-193-5p mature miRNA
• Sequence: 29 - UGGGAUUUUGUGGACCAGAAG - 49
• Evidence: experimental ; 454 [1]

Mature aae-miR-193-3p

• Accession: MIMAT0014305
• Description: Aedes aegypti aae-miR-193-3p mature miRNA
• Sequence: 72 - UACUGGCCUACUAAGUCCCAAC - 93
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581