miRBase entry: aae-mir-193

Stem-loop aae-mir-193


Accession
MI0013511
Description
Aedes aegypti aae-mir-193 precursor miRNA


Sequence

6285 reads, 339 reads per million, 2 experiments
gcuugcuauguaauuuuuucaaucgaacugggauuuuguggaccagaagauuuccuccauucgauaauagcUACUGGCCUACUAAGUCCCAACuuguuuggaaauuguccgacagauagcaagc
(((((((((((....(((((((.(((..((((((((.((((.((((.((......((.....))......)).)))).)))).))))))))..))).))))))).......)))..))))))))

Structure
        --   ---aauu       u   ac        u    a    a  auuucc  c 
gcuugcua  ugu       uuuucaa cga  ugggauuu gugg ccag ag      uc a
||||||||  |||       ||||||| |||  |||||||| |||| |||| ||      || u
cgaacgau  aca       aaagguu guu  ACCCUGAA CAUC GGUC Uc      ag u
        ag   gccuguu       u   CA        U    C    A  gauaau  c 


Annotation confidence Not enough data
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Genome context
supercont1.519: 717066-717189 [+]

Database links

Mature aae-miR-193

Accession MIMAT0014305
Description Aedes aegypti aae-miR-193 mature miRNA
Sequence 72 - UACUGGCCUACUAAGUCCCAAC - 93
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581