Stem-loop aae-mir-2942

Accession

MI0013506

Description

Aedes aegypti aae-mir-2942 precursor miRNA

Literature search

1 open access papers mention aae-mir-2942
(1 sentences)

Sequence

2537 reads, 13.0 reads per million, 74 experiments

aauguuaucaaUUCGCUGUGGUCUCGAACGUACCuacauuggauauuuuuggUAUUCGAGACUUCACGAGUUAAUucccauu
.........((((((.((.((((((((..(((((................))))))))))))).))))))))..........

Structure

-aauguuauc      C  U        AC     uacauug 
          aaUUCG UG GGUCUCGA  GUACC       g
          |||||| || ||||||||  |||||        
          UUGAGC AC UCAGAGCU  UAUgg       a
uuacccuUAA      -  U        --     uuuuuau 

Annotation confidence Medium

Genome context

ref|NW_001810947.1|: 212398-212479 [+]

Mature aae-miR-2942-5p

• Accession: MIMAT0057357
• Description: Aedes aegypti aae-miR-2942-5p mature miRNA
• Sequence: 12 - UUCGCUGUGGUCUCGAACGUACC - 34
• Evidence: experimental ; 454 [1]

Mature aae-miR-2942-3p

• Accession: MIMAT0014300
• Description: Aedes aegypti aae-miR-2942-3p mature miRNA
• Sequence: 53 - UAUUCGAGACUUCACGAGUUAAU - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581