Stem-loop aae-let-7

Accession

MI0013505

Description

Aedes aegypti aae-let-7 precursor miRNA

Literature search

18 open access papers mention aae-let-7
(41 sentences)

Sequence

3065960 reads, 17965.0 reads per million, 91 experiments

cacguUGAGGUAGUUGGUUGUAUAGUagugacugauuaaauaucugCUAUGCAAUCUGCUAGCUUGUCgug
((((..(((.((((.(((((((((((((...............))))))))))))).)))).)))..))))

Structure

    uU   G    U             ugacug 
cacg  GAG UAGU GGUUGUAUAGUag      a
||||  ||| |||| |||||||||||||      u
gugC  UUC AUCG CUAACGUAUCguc      u
    UG   G    U             uauaaa 

Annotation confidence High

Genome context

ref|NW_001811163.1|: 1156326-1156396 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aae-let-7

Mature aae-let-7-5p

• Accession: MIMAT0014299
• Description: Aedes aegypti aae-let-7-5p mature miRNA
• Sequence: 6 - UGAGGUAGUUGGUUGUAUAGU - 26
• Evidence: experimental ; 454 [1]

Mature aae-let-7-3p

• Accession: MIMAT0057356
• Description: Aedes aegypti aae-let-7-3p mature miRNA
• Sequence: 47 - CUAUGCAAUCUGCUAGCUUGUC - 68
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581