miRBase entry: aae-mir-2765

Stem-loop aae-mir-2765


Accession
MI0013490
Description
Aedes aegypti aae-mir-2765 precursor miRNA

Literature search
1 open access papers mention aae-mir-2765
(1 sentences)

Sequence

1625 reads, 87 reads per million, 2 experiments
aaacguuuccggagccUGGUAACUCCACCACCGUUGGCgauauuugacagccaaugggagcuggaguucccgcgugccgaacguuca
.((((((..(((.((.(((.((((((((..((((((((...........))))))))..).))))))).))).)).)))))))))..

Structure
-a      uc   a  c   U       - CA        gaua 
  aacguu  cgg gc UGG AACUCCA C  CCGUUGGC    u
  ||||||  ||| || ||| ||||||| |  ||||||||    u
  uugcaa  gcc ug gcc uugaggu g  gguaaccg    u
ac      --   g  c   c       c ag        acag 


Annotation confidence Not enough data
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Comments
This miRNA was experimentally identified in the closely related Aedes albopictus, for which there was no genome sequence, and therefore mapped to the Aedes aegypti genome [1].

Genome context
supercont1.1: 5248294-5248380 [+]

Database links

Mature aae-miR-2765

Accession MIMAT0014285
Description Aedes aegypti aae-miR-2765 mature miRNA
Sequence 17 - UGGUAACUCCACCACCGUUGGC - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119