Stem-loop aae-mir-2765

Accession

MI0013490

Description

Aedes aegypti aae-mir-2765 precursor miRNA

Literature search

1 open access papers mention aae-mir-2765
(1 sentences)

Sequence

1625 reads, 87 reads per million, 2 experiments

aaacguuuccggagccUGGUAACUCCACCACCGUUGGCgauauuugacagccaaugggagcuggaguucccgcgugccgaacguuca
.((((((..(((.((.(((.((((((((..((((((((...........))))))))..).))))))).))).)).)))))))))..

Structure

-a      uc   a  c   U       - CA        gaua 
  aacguu  cgg gc UGG AACUCCA C  CCGUUGGC    u
  ||||||  ||| || ||| ||||||| |  ||||||||    u
  uugcaa  gcc ug gcc uugaggu g  gguaaccg    u
ac      --   g  c   c       c ag        acag 

Annotation confidence Not enough data

Comments

This miRNA was experimentally identified in the closely related Aedes albopictus, for which there was no genome sequence, and therefore mapped to the Aedes aegypti genome [1].

Genome context

supercont1.1: 5248294-5248380 [+]

Mature aae-miR-2765

• Accession: MIMAT0014285
• Description: Aedes aegypti aae-miR-2765 mature miRNA
• Sequence: 17 - UGGUAACUCCACCACCGUUGGC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119