miRBase entry: aae-mir-276-1

Stem-loop aae-mir-276-1


Accession
MI0013441
Description
Aedes aegypti aae-mir-276-1 precursor miRNA

Literature search
2 open access papers mention aae-mir-276-1
(5 sentences)

Sequence

708718 reads, 35626 reads per million, 2 experiments
acuggugauugccaucAGCGAGGUAUAGAGUUCCUACguugcgugugcgaaauuggUAGGAACUUCAUACCGUGCUCuuggcuagccguga
..((((....((((..((((.(((((.((((((((((.((((....)))).....)))))))))).))))).))))..))))..))))...

Structure
-ac    gauu    uc    A     A          ----g    g 
   uggu    gcca  AGCG GGUAU GAGUUCCUAC     uugc u
   ||||    ||||  |||| ||||| ||||||||||     ||||  
   gccg    cggu  UCGU CCAUA UUCAAGGAUg     agcg g
agu    --au    uC    G     C          guuaa    u 


Annotation confidence High
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Genome context
supercont1.134: 38970-39060 [+]

Database links

Mature aae-miR-276-5p

Accession MIMAT0014222
Description Aedes aegypti aae-miR-276-5p mature miRNA
Sequence 17 - AGCGAGGUAUAGAGUUCCUAC - 37
Evidence experimental
454 [1]

Mature aae-miR-276-3p

Accession MIMAT0014223
Description Aedes aegypti aae-miR-276-3p mature miRNA
Sequence 57 - UAGGAACUUCAUACCGUGCUC - 77
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581

  2. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119