Stem-loop aae-mir-276-1

Accession

MI0013441

Description

Aedes aegypti aae-mir-276-1 precursor miRNA

Literature search

2 open access papers mention aae-mir-276-1
(5 sentences)

Sequence

708718 reads, 35626 reads per million, 2 experiments

acuggugauugccaucAGCGAGGUAUAGAGUUCCUACguugcgugugcgaaauuggUAGGAACUUCAUACCGUGCUCuuggcuagccguga
..((((....((((..((((.(((((.((((((((((.((((....)))).....)))))))))).))))).))))..))))..))))...

Structure

-ac    gauu    uc    A     A          ----g    g 
   uggu    gcca  AGCG GGUAU GAGUUCCUAC     uugc u
   ||||    ||||  |||| ||||| ||||||||||     ||||  
   gccg    cggu  UCGU CCAUA UUCAAGGAUg     agcg g
agu    --au    uC    G     C          guuaa    u 

Annotation confidence High

Genome context

supercont1.134: 38970-39060 [+]

Mature aae-miR-276-5p

• Accession: MIMAT0014222
• Description: Aedes aegypti aae-miR-276-5p mature miRNA
• Sequence: 17 - AGCGAGGUAUAGAGUUCCUAC - 37
• Evidence: experimental ; 454 [1]

Mature aae-miR-276-3p

• Accession: MIMAT0014223
• Description: Aedes aegypti aae-miR-276-3p mature miRNA
• Sequence: 57 - UAGGAACUUCAUACCGUGCUC - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581


2. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119