Stem-loop rco-MIR398a

Accession

MI0013420

Description

Ricinus communis rco-MIR398a precursor miRNA

Literature search

2 open access papers mention rco-MIR398a
(6 sentences)

Sequence

ccagaggaguggcucccugagaacacacgugcauuggcucucaccuuuuguaguuccacugcaccUGUGUUCUCAGGUCACCCCUUugggg
(((((((.((((...((((((((((((.(((((.(((..((((.....)).))..))).))))).)))))))))))))))).)))))))..

Structure

--       a    cuc            c     u   cu  -  c 
  ccagagg gugg   ccugagaacaca gugca ugg  cu ca c
  ||||||| ||||   |||||||||||| ||||| |||  || || u
  gguUUCC CACU   GGACUCUUGUGU cacgu acc  ga gu u
gg       C    ---            c     c   uu  u  u 

Annotation confidence Not enough data

Genome context

EQ973775.1: 3280015-3280105 [+]

Mature rco-miR398a

• Accession: MIMAT0014194
• Description: Ricinus communis rco-miR398a mature miRNA
• Sequence: 66 - UGUGUUCUCAGGUCACCCCUU - 86
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995