Stem-loop rco-MIR396

Accession

MI0013418

Description

Ricinus communis rco-MIR396 precursor miRNA

Literature search

2 open access papers mention rco-MIR396
(5 sentences)

Sequence

ugcuuUUCCACAGCUUUCUUGAACUUcuucuucuucuucuucuucuucuuagauuucuuucucauugccuauaucuuucuugauguggcacagaauaaguucaagaaagcugugggagaacaug
((.(((((((((((((((((((((((.((((...................(((......)))...((((.(((((......))))))))).)))).))))))))))))))))))))))).))..

Structure

--  c                       c    ucuucuucuucuucuucuuagauuucuuucucau    u     uu 
  ug uuUUCCACAGCUUUCUUGAACUU uucu                                  ugcc auauc  u
  || ||||||||||||||||||||||| ||||                                  |||| |||||   
  ac agagggugucgaaagaacuugaa aaga                                  acgg uguag  c
gu  a                       u    ---------------------------------c    -     uu 

Annotation confidence Not enough data

Genome context

EQ973818.1: 920136-920259 [+]

Mature rco-miR396

• Accession: MIMAT0014192
• Description: Ricinus communis rco-miR396 mature miRNA
• Sequence: 6 - UUCCACAGCUUUCUUGAACUU - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995