Stem-loop rco-MIR393

Accession

MI0013412

Description

Ricinus communis rco-MIR393 precursor miRNA

Literature search

2 open access papers mention rco-MIR393
(11 sentences)

Sequence

aaaguUCCAAAGGGAUCGCAUUGAUCuaaugucguuggguaccuaaaugaguuaauuauaaaucuauaauccaauucauuggaucaugcgaucccuuaggaagucucc
..(.((((.((((((((((((.(((((((((..(((((((............................))))))).))))))))))))))))))))).)))).)....

Structure

--aa g    A            U         uc       accuaaaugaguu 
    a uUCC AAGGGAUCGCAU GAUCuaaug  guugggu             a
    | |||| |||||||||||| |||||||||  |||||||              
    u aagg uucccuagcgua cuagguuac  uaaccua             a
ccuc g    a            -         -u       auaucuaaauauu 

Annotation confidence Not enough data

Genome context

EQ973773.1: 26964-27071 [+]

Mature rco-miR393

• Accession: MIMAT0014186
• Description: Ricinus communis rco-miR393 mature miRNA
• Sequence: 6 - UCCAAAGGGAUCGCAUUGAUC - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995