Stem-loop rco-MIR168

Accession

MI0013394

Description

Ricinus communis rco-MIR168 precursor miRNA

Literature search

2 open access papers mention rco-MIR168
(5 sentences)

Sequence

cuaauUCGCUUGGUGCAGGUCGGGAAcugauuggcuuuucuauuucuaaugauuuccaggcggcgaaaaguuauuggucaagauuagauggaaagugaauuggaucccgccuugcaucaacugaaucgaag
...(((((.((((((((((.(((((.((((((.(((((((....((((((.....((((..(((.....))).)))).....)))))).))))))).)))))).))))).)))))))))).))))).....

Structure

--cua     C          U     A      g       uauu      gauuu    gc   g 
     auUCG UUGGUGCAGG CGGGA cugauu gcuuuuc    ucuaau     ccag  ggc a
     ||||| |||||||||| ||||| |||||| |||||||    ||||||     ||||  ||| a
     uaagu aacuacguuc gcccu gguuaa ugaaagg    agauua     gguu  uug a
gaagc     c          c     a      g       ---u      gaacu    -a   a 

Annotation confidence Low

Genome context

EQ973781.1: 686511-686641 [+]

Mature rco-miR168

• Accession: MIMAT0014168
• Description: Ricinus communis rco-miR168 mature miRNA
• Sequence: 6 - UCGCUUGGUGCAGGUCGGGAA - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995