Stem-loop rco-MIR166a

Accession

MI0013386

Description

Ricinus communis rco-MIR166a precursor miRNA

Literature search

2 open access papers mention rco-MIR166a
(5 sentences)

Sequence

uaaggggaauguugucugguucaaggccuaccuauugaucuguuucaguuucauucaauauacugaaaaaucuguauaugggaaacuauccuguggucgauuugaucauuucuuaggaucuccUCGGACCAGGCUUCAUUCCCCuuaau
(((((((((((..(((((((((.(((((((.....(((((...((((((............))))))(((((.(..(((((((.....)))))))..))))))))))).....))))....))).)))))))))..)))))))))))..

Structure

--           uu         a   ----    ccuau     uguuucaguuucauucaauauacugaa     u ua       a 
  uaaggggaaug  gucugguuc agg    ccua     ugauc                           aaauc g  uauggga a
  |||||||||||  ||||||||| |||    ||||     |||||                           ||||| |  ||||||| c
  auuCCCCUUAC  CGGACCAGG Ucc    ggau     acuag                           uuuag c  guguccu u
ua           UU         C   ucua    ucuuu     ---------------------------     - ug       a 

Annotation confidence Not enough data

Genome context

EQ973793.1: 790389-790537 [-]

Mature rco-miR166a

• Accession: MIMAT0014160
• Description: Ricinus communis rco-miR166a mature miRNA
• Sequence: 124 - UCGGACCAGGCUUCAUUCCCC - 144
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995