Stem-loop bma-mir-153

Accession

MI0013345

Description

Brugia malayi bma-mir-153 precursor miRNA

Literature search

3 open access papers mention bma-mir-153
(7 sentences)

Sequence

6280 reads, 127.0 reads per million, 20 experiments

uuccgcucgucgAUCAUUUUUGUGGAUUAGCAAUUuuguucucgaauaaUUGCAUAGUCACAAAAGUGAUGgacgugaagcgucguuugu
...((((((((.((((((((((((.(((((((((((((....)))..)))))).)))))))))))))))).))))...))))........

Structure

-----uuc    ---    g            G    -      --   u 
        cgcu   cguc AUCAUUUUUGUG AUUA GCAAUU  uug u
        ||||   |||| |||||||||||| |||| ||||||  |||  
        gcga   gcag UAGUGAAAACAC UGAU CGUUaa  agc c
uguuugcu    agu    G            -    A      ua   u 

Annotation confidence High

Genome context

Unknown

Mature bma-miR-153-5p

• Accession: MIMAT0057217
• Description: Brugia malayi bma-miR-153-5p mature miRNA
• Sequence: 13 - AUCAUUUUUGUGGAUUAGCAAUU - 35
• Evidence: experimental ; Northern [1], Illumina [2]

Mature bma-miR-153-3p

• Accession: MIMAT0014119
• Description: Brugia malayi bma-miR-153-3p mature miRNA
• Sequence: 50 - UUGCAUAGUCACAAAAGUGAUG - 71
• Evidence: experimental ; Northern [1], Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498