miRBase entry: bma-mir-133

Stem-loop bma-mir-133


Accession
MI0013343
Description
Brugia malayi bma-mir-133 precursor miRNA


Sequence

uugauuggacaagguaugcuaugacggacauuuacauaccugguuguagucgaaccaaauuguuauauuuuuaaaaucaaUUGGUCCCCUUCAACCAGCUAuguuucuccuccuguaaacaucuaguuaa
.((((((((....((.(((...((.(((.....(((((.(((((((.((..((.((((.(((...............)))))))))..)).))))))).)))))...)))))..))).)).)))))))).

Structure
u        caag  a   uau  c   cauuu     c       u  uc  a    a   uuauau 
 ugauugga    gu ugc   ga gga     acaua cugguug ag  ga ccaa uug      u
 ||||||||    || |||   || |||     ||||| ||||||| ||  || |||| |||      u
 auugaucu    ca aug   cu ccu     uguAU GACCAAC UC  CU GGUU aac      u
a        ---a  a   -uc  -   --cuu     C       U  CC  -    -   uaaaau 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold1: 3609224-3609353 [+]

Database links

Mature bma-miR-133

Accession MIMAT0014117
Description Brugia malayi bma-miR-133 mature miRNA
Sequence 81 - UUGGUCCCCUUCAACCAGCUA - 101
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498