Stem-loop bma-mir-92

Accession

MI0013337

Description

Brugia malayi bma-mir-92 precursor miRNA

Literature search

9 open access papers mention bma-mir-92
(21 sentences)

Sequence

134084 reads, 40037.0 reads per million, 26 experiments

cauacugcacuaaucagucAGGUCGAGUCGUUUGCACUAUUcagacagaaguucaucauuuggcgaUAUUGCACUCGUCCCGGCCUgaguguuagcugcuauuau
......(((((((.((.((((((((.(.((..((((.((((....((((.(.....).))))..)))).))))..)).).)))))))).)))))).)))......

Structure

cauacu   -    u  g        A U  UU    C    caga    a u 
      gca cuaa ca ucAGGUCG G CG  UGCA UAUU    caga g u
      ||| |||| || |||||||| | ||  |||| ||||    |||| | c
      cgu gauu gu agUCCGGC C GC  ACGU AUag    guuu c a
uauuau   c    -  g        C U  UC    U    --cg    a u 

Annotation confidence High

Genome context

Bmal_v3_scaffold1: 1946337-1946441 [-]

Mature bma-miR-92-5p

• Accession: MIMAT0057210
• Description: Brugia malayi bma-miR-92-5p mature miRNA
• Sequence: 20 - AGGUCGAGUCGUUUGCACUAUU - 41
• Evidence: experimental ; Illumina [2]

Mature bma-miR-92-3p

• Accession: MIMAT0014111
• Description: Brugia malayi bma-miR-92-3p mature miRNA
• Sequence: 67 - UAUUGCACUCGUCCCGGCCU - 86
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498