miRBase entry: bma-mir-92

Stem-loop bma-mir-92


Accession
MI0013337
Description
Brugia malayi bma-mir-92 precursor miRNA

Literature search
3 open access papers mention bma-mir-92
(8 sentences)

Sequence

cauacugcacuaaucagucaggucgagucguuugcacuauucagacagaaguucaucauuuggcgaUAUUGCACUCGUCCCGGCCUgaguguuagcugcuauuau
......(((((((.((.((((((((.(.((..((((.((((....((((.(.....).))))..)))).))))..)).).)))))))).)))))).)))......

Structure
cauacu   -    u  g        a u  uu    c    caga    a u 
      gca cuaa ca ucaggucg g cg  ugca uauu    caga g u
      ||| |||| || |||||||| | ||  |||| ||||    |||| | c
      cgu gauu gu agUCCGGC C GC  ACGU AUag    guuu c a
uauuau   c    -  g        C U  UC    U    --cg    a u 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold1: 1946337-1946441 [-]

Database links

Mature bma-miR-92

Accession MIMAT0014111
Description Brugia malayi bma-miR-92 mature miRNA
Sequence 67 - UAUUGCACUCGUCCCGGCCU - 86
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498