miRBase entry: bma-mir-87b

Stem-loop bma-mir-87b


Accession
MI0013336
Description
Brugia malayi bma-mir-87b precursor miRNA

Literature search
1 open access papers mention bma-mir-87b
(1 sentences)

Sequence

uucgcaaucccgccugacacucagucucaaccucugauguuaggaagGUGAGCAAAGUCUCAGGUGUcauugcggaaguuaccaaac
((((((((..(((((((.(((..(.((((.(((((.......)).))))))))..))).)))))))..))))))))...........

Structure
-----------        cc       c   ca u    a   -  ga 
           uucgcaau  cgccuga acu  g cuca ccu cu  u
           ||||||||  ||||||| |||  | |||| ||| ||  g
           aggcguua  GUGGACU UGA  C GAGU Gga gg  u
caaaccauuga        cU       C   AA -    -   a  au 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold4: 629946-630032 [+]

Database links

Mature bma-miR-87b

Accession MIMAT0014110
Description Brugia malayi bma-miR-87b mature miRNA
Sequence 48 - GUGAGCAAAGUCUCAGGUGU - 67
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498