miRBase entry: bma-mir-87a

Stem-loop bma-mir-87a


Accession
MI0013335
Description
Brugia malayi bma-mir-87a precursor miRNA

Literature search
1 open access papers mention bma-mir-87a
(1 sentences)

Sequence

agugcucggcgccugggacuucgacucaaccuaaguauuuucaaguguagGUGAGCAAAGUUUCAGGUGUUcgagcgccuucgcauuuucc
.((((((((((((((((((((.(.((((.((((..((((....))))))))))))).)))))))))))).)))))))).............

Structure
------------a        -            c a    a    ag    u 
             gugcucgg cgccugggacuu g cuca ccua  uauu u
             |||||||| |||||||||||| | |||| ||||  ||||  
             cgcgagcU GUGGACUUUGAA C GAGU Ggau  guga c
ccuuuuacgcuuc        U            A -    -    --    a 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold141: 63125-63215 [-]

Database links

Mature bma-miR-87a

Accession MIMAT0014109
Description Brugia malayi bma-miR-87a mature miRNA
Sequence 51 - GUGAGCAAAGUUUCAGGUGUU - 71
Evidence experimental
cloned [1], Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498