Stem-loop bma-mir-72

Accession

MI0013333

Description

Brugia malayi bma-mir-72 precursor miRNA

Literature search

2 open access papers mention bma-mir-72
(2 sentences)

Sequence

ucaugggacacgggacaAGGCAAGAUGUUGGCAUAGCUGAacaugauaacgauuaggcucuaguuuagagccuaaucaauuugcauagagcuucagcagugccacauuaggccau
..................(((..(((((.(((((.((((((((((..((.((((((((((((...))))))))))))..))..)))...).)))))).))))))))))..)))..

Structure

ucaugggacacgggacaA   AA     U     A      - ---   au  -c            g 
                  GGC  GAUGU GGCAU GCUGAa c   aug  aa  gauuaggcucua  
                  |||  ||||| ||||| |||||| |   |||  ||  |||||||||||| u
                  ccg  uuaca ccgug cgacuu g   uac  uu  cuaauccgagau  
----------------ua   ga     -     a      c aga   gu  aa            u 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold8: 872016-872130 [-]

Mature bma-miR-72

• Accession: MIMAT0014107
• Description: Brugia malayi bma-miR-72 mature miRNA
• Sequence: 18 - AGGCAAGAUGUUGGCAUAGCUGA - 40
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498