miRBase entry: bma-mir-7

Stem-loop bma-mir-7


Accession
MI0013325
Description
Brugia malayi bma-mir-7 precursor miRNA


Sequence

aaaaguuaaagcugaccaggUGGAAGACUUGUGAUUUUGUUGUuuauacauuuucagcaacagcaaauccgagcucuccacccggaggcau
..........(((..((.((((((.((((((.((((((((((((...........)))))))..))))))))).)))))))).)).)))..

Structure
aaaaguuaaa   ga  a      A  -    U     --       uaua 
          gcu  cc ggUGGA GA CUUG GAUUU  UGUUGUu    c
          |||  || |||||| || |||| |||||  |||||||    a
          cgg  gg ccaccu cu gagc cuaaa  acaacga    u
--------ua   -a  c      -  c    -     cg       cuuu 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold1: 2387985-2388075 [-]

Database links

Mature bma-miR-7

Accession MIMAT0014099
Description Brugia malayi bma-miR-7 mature miRNA
Sequence 21 - UGGAAGACUUGUGAUUUUGUUGU - 43
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498