Accession
MI0013304
Description
Citrus clementina
ccl-MIR396 precursor miRNA
Sequence
agagugguccuugaaauagccucuuuguaugggcuuccugcuuaauucuuccucucuaacaucgaguguaaaaugaauggaagaucaucaagccacagauaugagaucugaacauuauuauuauuaaguccuggucaugcuuUUCCACAGCUUUCUUGAACUUccacuguuugcugauuaauacacggcucuugcuagcuaggcgccguauguagacaccgcgcgccaugggagcucaagaaagcugugggagaacauggcacaccuucaggauuug
.....((((((.(((..(((((........)))))...((((...(((((((.(((.......))).(((((..(..((((((.(((..((((..(((((.....))))).....................(((..........)))..))))...))).)))))))..)))))..........((((((((((((..((((((((((..((....)).)).))))).))).)))..))))..))))))))))))...))))....)))))))))..
.....((((((.(((..(((((........)))))...((((...(((((((.(((.......))).(((((..(..((((((.(((..((((..(((((.....))))).....................(((..........)))..))))...))).)))))))..)))))..........((((((((((((..((((((((((..((....)).)).))))).))).)))..))))..))))))))))))...))))....)))))))))..
Structure
agagu u auagccucuuuguaugggcuucc uaa -----------------------------------------------------------ucucuaacaucgagu au aa a -uc cacagauaugagaucugaacauuauuauuauuaagucc ucau
gguccu gaa ugcu uucuucc guaaa g uggaag uca aagc ugg g
|||||| ||| |||| ||||||| ||||| | |||||| ||| |||| |||
uuagga cuu acgg aagaggg cguuu c accUUC AGU UUCG ACC c
---gu - -------------------ccac uac ugucgaaagaacucgaggguaccgcgcgccacagauguaugccgcggaucgaucguucucggcacauaauuagu gu -- A UCU ------------------------------------AC UUuu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Unknown
Database links
Mature ccl-miR396
| Accession | MIMAT0014078 |
| Description | Citrus clementina ccl-miR396 mature miRNA |
| Sequence | 143 - UUCCACAGCUUUCUUGAACUU - 163 |
| Evidence |
experimental
Northern [1] |
References
|
