Accession
MI0013301
Description
Citrus clementina
ccl-MIR171 precursor miRNA
Sequence
gaucucuuggggguuaaaaugaagauuguggugaccauuuuggaggauggauggguacucacgggauauuggugcgguucaauaagaaaacggugcucaauacuuuuugagcuccgcuuuuUGAUUGAGCCGCGCCAAUAUCacgugccacucgcucucuaauugcuuucuuuuaagcacaggggagcgcguaauuauguugaggucagguaaguagggguuuaaauuaaaauucuagcuuauugcuucuguuuaaauuuuacuguucaauuggcuccauuuagaugcaucauuguuuuuauguuaugacccuuucgaauu
....((..((((((((..((((((((.((((((..((((((((((..(((((..((((.((........)))))).)))))....((((.(((.((((((......)))))).))).)))).((((((((.((((.........)))).((.((((((((...(((((......)))))..)))))))).)).........(((((..(((((((.(((((((......))))))).))))))))))))...............))))))))..)))))...))))))))))).))))))))....))))))))..))...
....((..((((((((..((((((((.((((((..((((((((((..(((((..((((.((........)))))).)))))....((((.(((.((((((......)))))).))).)))).((((((((.((((.........)))).((.((((((((...(((((......)))))..)))))))).)).........(((((..(((((((.(((((((......))))))).))))))))))))...............))))))))..)))))...))))))))))).))))))))....))))))))..))...
Structure
gauc uu --aa u ac --- gauggauggguacucacgggauauuggugcgguucaauaagaaaacggugcucaauacuuuuugagcuccgcuuuuU -------------------------------------------------------------------------------------------------------------------C CAA
uc ggggguua augaagau guggug cauuu uggag GAUUGAGC GCGC U
|| |||||||| |||||||| |||||| ||||| ||||| |||||||| |||| A
ag uucccagu uauuuuug uacuac guaga accuc uuaacuug cgug U
-uua cu auug u -- uuu ---------------------------------------------------------------------------gg ucauuuuaaauuugucuucguuauucgaucuuaaaauuaaauuuggggaugaauggacuggaguuguauuaaugcgcgaggggacacgaauuuucuuucguuaaucucucgcucac caC
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Unknown
Database links
Mature ccl-miR171
| Accession | MIMAT0014075 |
| Description | Citrus clementina ccl-miR171 mature miRNA |
| Sequence | 122 - UGAUUGAGCCGCGCCAAUAUC - 142 |
| Evidence |
experimental
Northern [1] |
References
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