Stem-loop zma-MIR528b

Accession

MI0013240

Description

Zea mays zma-MIR528b precursor miRNA MIR528

Gene
family

RF04083; MIR528

Literature search

18 open access papers mention zma-MIR528b
(107 sentences)

Sequence

2954 reads, 5277 reads per million, 3 experiments

gUGGAAGGGGCAUGCAGAGGAGcacgaacgaggugugguuggccccucguuagcucuCCUGUGCCUGCCUCUUCCAUU
((((((((((((.(((.(((((..(.(((((((.((.....)).))))))).)..))))).))).)))))))))))).

Structure

-            U   G     ca g       u  g 
 gUGGAAGGGGCA GCA AGGAG  c aacgagg gu g
 |||||||||||| ||| |||||  | ||||||| || u
 UACCUUCUCCGU CGU UCCuc  g uugcucc cg u
U            C   G     uc a       c  g 

Annotation confidence Not enough data

Genome context

chr9: 156643654-156643731 [-]

Mature zma-miR528b-5p

• Accession: MIMAT0014029
• Description: Zea mays zma-miR528b-5p mature miRNA
• Sequence: 2 - UGGAAGGGGCAUGCAGAGGAG - 22
• Evidence: experimental ; Illumina [1]

Mature zma-miR528b-3p

• Accession: MIMAT0015363
• Description: Zea mays zma-miR528b-3p mature miRNA
• Sequence: 58 - CCUGUGCCUGCCUCUUCCAUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716