Stem-loop zma-MIR395m

Accession

MI0013221

Description

Zea mays zma-MIR395m precursor miRNA

Literature search

18 open access papers mention zma-MIR395m
(85 sentences)

Sequence

aGUUCCUUUCAAACACUUCACAUggagcuucucauugguggauauauucuugagacccguGUGAAGUGUUUGGAGGAACUCu
((((((((.((((((((((((((((.(..(((((..((((....))))..))))))))))))))))))))))))))))))..

Structure

--        U                a cu     uu    g 
  aGUUCCUU CAAACACUUCACAUgg g  ucuca  ggug a
  |||||||| |||||||||||||||| |  |||||  ||||  
  UCAAGGAG GUUUGUGAAGUGugcc c  agagu  uuau u
uC        -                - --     uc    a 

Annotation confidence Not enough data

Genome context

chr10: 78600541-78600622 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from zma-MIR395m

Mature zma-miR395m-5p

• Accession: MIMAT0015345
• Description: Zea mays zma-miR395m-5p mature miRNA
• Sequence: 2 - GUUCCUUUCAAACACUUCACAU - 23
• Evidence: not_experimental

Mature zma-miR395m-3p

• Accession: MIMAT0014010
• Description: Zea mays zma-miR395m-3p mature miRNA
• Sequence: 61 - GUGAAGUGUUUGGAGGAACUC - 81
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716