Stem-loop bhv1-mir-B4

Accession

MI0013176

Description

Bovine herpesvirus 1 bhv1-mir-B4 precursor miRNA

Sequence

gcgcggcCGCGUGAUGUAGAGGGUGACGcgaacggcagcgccgggacucgcgucuuccggcgacaccagccgcgc
(((((((.(.(((.(((...(((.(((((((.((((...))))....))))))).))).))).)))).)))))))

Structure

       C C   A   AGA   U       ---a    a 
gcgcggc G GUG UGU   GGG GACGcga    cggc  
||||||| | ||| |||   ||| |||||||    |||| g
cgcgccg c cac gcg   ccu cugcgcu    gccg  
       a -   a   --g   u       cagg    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature bhv1-miR-B4

• Accession: MIMAT0013965
• Description: Bovine herpesvirus 1 bhv1-miR-B4 mature miRNA
• Sequence: 8 - CGCGUGAUGUAGAGGGUGACG - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19793906
   Characterization of microRNAs encoded by the bovine herpesvirus 1 genome
   "Glazov EA, Horwood PF, Assavalapsakul W, Kongsuwan K, Mitchell RW, Mitter N, Mahony TJ"
   "J Gen Virol (2010) 91:32-41