Stem-loop bhv1-mir-B2

Accession

MI0013174

Description

Bovine herpesvirus 1 bhv1-mir-B2 precursor miRNA

Sequence

GCCGGCGCAUUGUGGAGACGggcagcgcggacgagcuacggagagccgagggccacguccgcgcgaugcugcugcaccuauacgccggc
(((((((.((.(((.((.(((...(((((((((.(((.(((....)))..)))..)))))))))....))))).)))..)).)))))))

Structure

       C  -U   G  A   -gca         -a   -a   a 
GCCGGCG AU  GUG AG CGg    gcgcggacg  gcu  cgg g
||||||| ||  ||| || |||    |||||||||  |||  |||  
cggccgc ua  cac uc guc    cgcgccugc  cgg  gcc a
       a  uc   g  -   guag         ac   ga   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature bhv1-miR-B2

• Accession: MIMAT0013963
• Description: Bovine herpesvirus 1 bhv1-miR-B2 mature miRNA
• Sequence: 1 - GCCGGCGCAUUGUGGAGACG - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19793906
   Characterization of microRNAs encoded by the bovine herpesvirus 1 genome
   "Glazov EA, Horwood PF, Assavalapsakul W, Kongsuwan K, Mitchell RW, Mitter N, Mahony TJ"
   "J Gen Virol (2010) 91:32-41