Accession
MI0013160
Description
Sus scrofa
ssc-mir-19b-1 precursor miRNA
Literature search
20 open access papers mention ssc-mir-19b-1
(34 sentences)
(34 sentences)
Sequence
955254
reads,
1432.0
reads per million, 214 experiments
cuguucuaugguuAGUUUUGCAGGUUUGCAUCCAGCUGugugauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugg
.....(((((((((((((((((((((((((..((((.............)))))))))).)).)))))))))))))))))
.....(((((((((((((((((((((((((..((((.............)))))))))).)).)))))))))))))))))
Structure
cuguu - - UC UGugu
cuaugguuAGUUUUGCA GG UUUGCA CAGC g
||||||||||||||||| || |||||| |||| a
ggugucAGUCAAAACGU CC AAACGU GUcg u
----- A U -- ucuua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr11: 66610642-66610721 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ssc-mir-19b-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-19b-1-5p
| Accession | MIMAT0052642 |
| Description | Sus scrofa ssc-miR-19b-1-5p mature miRNA |
| Sequence | 14 - AGUUUUGCAGGUUUGCAUCCAGCUG - 38 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
Mature ssc-miR-19b-3p
| Accession | MIMAT0013950 |
| Description | Sus scrofa ssc-miR-19b-3p mature miRNA |
| Sequence | 52 - UGUGCAAAUCCAUGCAAAACUGA - 74 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
References
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