miRBase entry: ssc-mir-23b

Stem-loop ssc-mir-23b

Sus scrofa ssc-mir-23b precursor miRNA
Gene family
MIPF0000027; mir-23

Literature search
19 open access papers mention ssc-mir-23b
(38 sentences)


205 reads, 164 reads per million, 12 experiments

cuc       u   --          -  c      gugacu 
   uggcugc ugg  guuccuggca ug ugauuu      u
   ||||||| |||  |||||||||| || ||||||       
   accgacg ACC  UAGGGACCGU AC ACUAaa      a
--c       c   AU          U  -      auuaga 

Annotation confidence Not enough data
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Genome context
chr10: 31341114-31341193 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ssc-mir-23b
Name Accession Chromosome Start End Strand Confidence

Database links

Mature ssc-miR-23b

Accession MIMAT0013893
Description Sus scrofa ssc-miR-23b mature miRNA
Evidence experimental
Illumina [1,3-4], cloned [2]


  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 20180025
    Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
    "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
    "Mol Biol Rep (2010) 37:3567-3574

  3. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  4. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100