Stem-loop iltv-mir-I3

Accession

MI0012483

Description

Infectious laryngotracheitis virus iltv-mir-I3 precursor miRNA

Sequence

cugcccgcucccgccggagaccgaguuacugcguuuagagcuaUCUUGUCUCUGGGUGGGUUCGGAgagu
((..(((..((((((((((((.(((.....((.......))...))))))))).))))))..)))..)).

Structure

-  gc   cu      -      c   uuacu  gu 
 cu  ccg  cccgcc ggagac gag     gc  u
 ||  |||  |||||| |||||| |||     ||  u
 ga  GGC  GGGUGG UCUCUG UUC     cg  a
u  gA   UU      G      -   --Uau  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature iltv-miR-I3

• Accession: MIMAT0012726
• Description: Infectious laryngotracheitis virus iltv-miR-I3 mature miRNA
• Sequence: 44 - UCUUGUCUCUGGGUGGGUUCGGA - 66
• Evidence: experimental ; Illumina [1], 454 [2]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136


2. PubMed ID: 19728068
   Identification and expression analysis of infectious laryngotracheitis virus encoding microRNAs
   "Rachamadugu R, Lee JY, Wooming A, Kong BW"
   "Virus Genes (2009) 39:301-308