Stem-loop hvt-mir-H3

Accession

MI0012475

Description

Herpesvirus of turkeys hvt-mir-H3 precursor miRNA

Sequence

cugCGUCAUGGAUCGCGGGGGGACGccgccgcggaccggucaauguggcgguuCCCGACGGAGGCUCGGCGguc
...((((..(..((.((..((((.(((((((((..........)))))))))))))..))))..)..))))...

Structure

cug    AU GA  G  GG    C         gacc 
   CGUC  G  UC CG  GGGA Gccgccgcg    g
   ||||  |  || ||  |||| |||||||||     
   GCGG  C  AG GC  CCCu uggcggugu    g
cug    CU GG  -  AG    -         aacu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvt-miR-H3-5p

• Accession: MIMAT0012712
• Description: Herpesvirus of turkeys hvt-miR-H3-5p mature miRNA
• Sequence: 4 - CGUCAUGGAUCGCGGGGGGACG - 25
• Evidence: experimental ; Illumina [1]

Mature hvt-miR-H3-3p

• Accession: MIMAT0012713
• Description: Herpesvirus of turkeys hvt-miR-H3-3p mature miRNA
• Sequence: 54 - CCCGACGGAGGCUCGGCG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136