Stem-loop hvt-mir-H2

Accession

MI0012474

Description

Herpesvirus of turkeys hvt-mir-H2 precursor miRNA

Sequence

gcggccgaucagcgcgcggcgggccgaccggcucgaggauaacgggCCCGUUCGGACGUUUCGGUUUucu
..((((((..((((..(((((((((..((.......))......)))))).)))..))))))))))....

Structure

--gc      uc    cg   -      ----ga  gg 
    ggccga  agcg  cgg cgggcc      cc  c
    ||||||  ||||  ||| ||||||      ||  u
    UUGGCU  UUGC  GCU GCCCgg      gg  c
ucuU      --    AG   U      gcaaua  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvt-miR-H2

• Accession: MIMAT0012711
• Description: Herpesvirus of turkeys hvt-miR-H2 mature miRNA
• Sequence: 47 - CCCGUUCGGACGUUUCGGUUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136