miRBase entry: isc-mir-750

Stem-loop isc-mir-750


Accession
MI0012284
Description
Ixodes scapularis isc-mir-750 precursor miRNA


Sequence


gguuggccgucccacucgaguuggaagugggauccugacacuugagcgcugucgguggugCCAGAUCUAACUCUUCCAGCUCAggugagguaccgguauuu
.....((((.((((((.(((((((((((((.((((((((((......).)))))).))).))).........)))))))))).)))).))...))))....

Structure
gguug    --u  -    c          ---------   g   -      - uu 
     gccg   cc cacu gaguuggaag         ugg auc cugaca c  g
     ||||   || |||| ||||||||||         ||| ||| |||||| |   
     uggc   gg gugg CUCGACCUUC         ACC ugg ggcugu g  a
-uuua    cau  a    A          UCAAUCUAG   g   u      c cg 


Annotation confidence Not enough data
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Genome context
ref|NW_024609838.1|: 27830425-27830525 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from isc-mir-750
Name Accession Chromosome Start End Strand Confidence




Database links

Mature isc-miR-750-3p

Accession MIMAT0012704
Description Ixodes scapularis isc-miR-750-3p mature miRNA
Sequence 61 - CCAGAUCUAACUCUUCCAGCUCA - 83
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68