Stem-loop isc-mir-12

Accession

MI0012264

Description

Ixodes scapularis isc-mir-12 precursor miRNA

Literature search

1 open access papers mention isc-mir-12
(1 sentences)

Sequence

gaucgcguuggggcugggacUGAGUAUUACAUCAGGUACUGGUcugguugcuggguaccaguaucugugugauauucaccccucgccccggcuaaacugcg
...(((((((((((.(((..(((((((((((.(((((((((((((........)).))))))))))))))))))))))..))).))))))))......)))

Structure

gau   ------        u   ac           U           -  ggu 
   cgc      guuggggc ggg  UGAGUAUUACA CAGGUACUGGU cu   u
   |||      |||||||| |||  ||||||||||| ||||||||||| ||    
   gcg      cggccccg ucc  acuuauagugu gucuaugacca gg   g
---   ucaaau        c   cc           -           u  guc 

Annotation confidence Low

Genome context

DS942119: 45739-45839 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from isc-mir-12

Mature isc-miR-12

• Accession: MIMAT0012684
• Description: Ixodes scapularis isc-miR-12 mature miRNA
• Sequence: 21 - UGAGUAUUACAUCAGGUACUGGU - 43
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68