miRBase entry: dpu-mir-965

Stem-loop dpu-mir-965


Accession
MI0012255
Description
Daphnia pulex dpu-mir-965 precursor miRNA


Sequence

aagugugcaaagcaagggaaagguuguagcucuuaugucucauuuugauuagcaUAAGCGUAUGGCUUUUCCCCUGcagugucacuugaug
(((((.(((..(((.(((((((((((((.(.(((((((.(((...)))...))))))).)))))))))))))).)))..))))))))....

Structure
----     u   aa   a             g u       --c   u 
    aagug gca  gca gggaaagguugua c cuuaugu   uca  
    ||||| |||  ||| ||||||||||||| | |||||||   ||| u
    uucac ugu  cGU CCCUUUUCGGUAU G GAAUacg   agu  
guag     -   ga   C             - C       auu   u 


Annotation confidence Not enough data
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Genome context
GL732554.1: 27767-27857 [-]

Database links

Mature dpu-miR-965

Accession MIMAT0012674
Description Daphnia pulex dpu-miR-965 mature miRNA
Sequence 55 - UAAGCGUAUGGCUUUUCCCCUG - 76
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68