Stem-loop dpu-mir-12

Accession

MI0012219

Description

Daphnia pulex dpu-mir-12 precursor miRNA

Literature search

2 open access papers mention dpu-mir-12
(10 sentences)

Sequence

gauuuugguguuuccguccgUGAGUAUUACAUCAGGUACUGGUuguaugugcaugauaccaguaccauuguaacacucucaacggucaacauuucugucaa
(((...((((((.((((....((((.(((((...(((((((((..(((....)))..)))))))))..))))).))))...))))..))))))...)))..

Structure

--   uuu      -u    ccgU    A     UCA         ug   g 
  gau   gguguu  ccgu    GAGU UUACA   GGUACUGGU  uau u
  |||   ||||||  ||||    |||| |||||   |||||||||  |||  
  cug   uuacaa  ggca    cuca aaugu   ccaugacca  gua g
aa   ucu      cu    -acu    c     -ua         ua   c 

Annotation confidence Not enough data

Genome context

GL732523.1: 1847825-1847925 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dpu-mir-12

Mature dpu-miR-12

• Accession: MIMAT0012638
• Description: Daphnia pulex dpu-miR-12 mature miRNA
• Sequence: 21 - UGAGUAUUACAUCAGGUACUGGU - 43
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68