miRBase entry: dpu-mir-10

Stem-loop dpu-mir-10


Accession
MI0012217
Description
Daphnia pulex dpu-mir-10 precursor miRNA

Literature search
1 open access papers mention dpu-mir-10
(1 sentences)

Sequence

guucaucaugcucuacaucUACCCUGUAGAUCCGAAUUUGUaguugcaucacaagacaaauucgguucuagagagguucguguggggcauaaacagcuaca
(((....(((((((((((..(((((.((((.((((((((((..(((.....))).)))))))))).)))).)).)))..)))))))))))....)))....

Structure
----   cauc           cU   -  G    U          ag   c 
    guu    augcucuacau  ACC CU UAGA CCGAAUUUGU  uug a
    |||    |||||||||||  ||| || |||| ||||||||||  ||| u
    cga    uacggggugug  ugg ga aucu ggcuuaaaca  aac c
acau   caaa           cu   a  g    u          -g   a 


Annotation confidence Not enough data
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Genome context
GL732529.1: 304804-304904 [-]

Database links

Mature dpu-miR-10

Accession MIMAT0012636
Description Daphnia pulex dpu-miR-10 mature miRNA
Sequence 20 - UACCCUGUAGAUCCGAAUUUGU - 41
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68