miRBase entry: aqc-MIR530

Stem-loop aqc-MIR530


Accession
MI0012111
Description
Aquilegia caerulea aqc-MIR530 precursor miRNA


Sequence

uggcauacgucUGCAUUUGCACCUGCAUCUCucaacauacaagauaugaagauauccauaugguuuucuucuucuucuugccgauuauuuugccguuggaguugggaagaagacgcagaugcaaaugcagacgaaugccauc
((((((.((((((((((((((.((((.(((((((((...(((((...(((((...((....))...)))))....)))))(((((.........))))).)))))))....)).)))).)))))))))))))).))))))..

Structure
--      a              C    A  ----       -----------------aua     -uau     uau  a 
  uggcau cgucUGCAUUUGCA CUGC UC    UCucaac                    caaga    gaaga   cc u
  |||||| |||||||||||||| |||| ||    |||||||                    |||||    |||||   ||  
  accgua gcagacguaaacgu gacg ag    aggguug                    guucu    cuucu   gg a
cu      a              a    c  aaga       agguugccguuuuauuagcc     ucuu     uuu  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR530

Accession MIMAT0012593
Description Aquilegia caerulea aqc-miR530 mature miRNA
Sequence 12 - UGCAUUUGCACCUGCAUCUC - 31
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56