miRBase entry: aqc-MIR396a

Stem-loop aqc-MIR396a


Accession
MI0012094
Description
Aquilegia caerulea aqc-MIR396a precursor miRNA


Sequence

UUCCACAGCUUUCUUGAACUGcaugguaaucuaaucuaauacagauaaaauuaagcuuguucuucaaguacauggugccauggugguauaucgccuuugcgguucaauaaagcugugggaaa
((((((((((((.((((((((((.(((......((((.....))))........(((((.....))))).....((((((...))))))...)))..)))))))))).))))))))))))..

Structure
--            C          -u   aaucuaaucuaauacagauaaaauuaagcuuguucuucaaguacaug      u 
  UUCCACAGCUUU UUGAACUGca  ggu                                               gugcca  
  |||||||||||| ||||||||||  |||                                               |||||| g
  agggugucgaaa aacuuggcgu  ccg                                               uauggu  
aa            u          uu   --------------------------------------------cua      g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR396a

Accession MIMAT0012576
Description Aquilegia caerulea aqc-miR396a mature miRNA
Sequence 1 - UUCCACAGCUUUCUUGAACUG - 21
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56