Stem-loop aqc-MIR171e

Accession

MI0012088

Description

Aquilegia caerulea aqc-MIR171e precursor miRNA

Sequence

gauauuggcacggcucaaucaaacaacugcaccacuuuuauuuacaucucuguaaacauuggugguauauauauaagucUGAAUGAACCGAGCCAACAUCac
(((.(((((.(((.(((.(((.((......((((((....((((((....))))))....))))))..........)).))).))).))).))))).)))..

Structure

--   a     a   c   a   a  ----aacugc      uuua      u 
  gau uuggc cgg uca uca ac          accacu    uuuaca c
  ||| ||||| ||| ||| ||| ||          ||||||    ||||||  
  CUA AACCG GCC AGU AGU ug          uggugg    aaaugu u
ca   C     A   A   A   c  aauauauaua      uuac      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature aqc-miR171e

• Accession: MIMAT0012570
• Description: Aquilegia caerulea aqc-miR171e mature miRNA
• Sequence: 80 - UGAAUGAACCGAGCCAACAUC - 100
• Evidence: not_experimental

References

1. PubMed ID: 19699282
   Identification of conserved Aquilegia coerulea microRNAs and their targets
   "Puzey JR, Kramer EM"
   "Gene (2009) 448:46-56