miRBase entry: aqc-MIR171e

Stem-loop aqc-MIR171e


Accession
MI0012088
Description
Aquilegia caerulea aqc-MIR171e precursor miRNA


Sequence

gauauuggcacggcucaaucaaacaacugcaccacuuuuauuuacaucucuguaaacauuggugguauauauauaagucUGAAUGAACCGAGCCAACAUCac
(((.(((((.(((.(((.(((.((......((((((....((((((....))))))....))))))..........)).))).))).))).))))).)))..

Structure
--   a     a   c   a   a  ----aacugc      uuua      u 
  gau uuggc cgg uca uca ac          accacu    uuuaca c
  ||| ||||| ||| ||| ||| ||          ||||||    ||||||  
  CUA AACCG GCC AGU AGU ug          uggugg    aaaugu u
ca   C     A   A   A   c  aauauauaua      uuac      c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR171e

Accession MIMAT0012570
Description Aquilegia caerulea aqc-miR171e mature miRNA
Sequence 80 - UGAAUGAACCGAGCCAACAUC - 100
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56