miRBase entry: aqc-MIR169b

Stem-loop aqc-MIR169b


Accession
MI0012082
Description
Aquilegia caerulea aqc-MIR169b precursor miRNA


Sequence

UAGCCAAGGAUGACUUGCCUGuauccucuuagaggccggccugcgcgccugucucuauauuaucauacauuggaauauaucauccuugugugguuaauaggcgggccugccugucucuauauuaucauacauuggaauauaucauccuugugugguuaauaggcagucuccuuggcuaac
((((((((((.((((.((((((.......(((((((.(((..((.(((((((.........((((((((..(((........))).))))))))..))))))).))..))).)))))))....((((((((..(((........))).))))))))..))))))))))))))))))))..

Structure
--          U    U      --------------------------------auccucu       c   cu  g       cucuauauu        uu   aua 
  UAGCCAAGGA GACU GCCUGu                                       uagaggc ggc  gc cgccugu         aucauaca  gga   u
  |||||||||| |||| ||||||                                       ||||||| |||  || |||||||         ||||||||  |||    
  aucgguuccu cuga cggaua                                       aucucug ccg  cg gcggaua         uggugugu  ccu   a
ca          -    -      auugguguguuccuacuauauaagguuacauacuauuau       u   uc  g       -------au        -u   acu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR169b

Accession MIMAT0012564
Description Aquilegia caerulea aqc-miR169b mature miRNA
Sequence 1 - UAGCCAAGGAUGACUUGCCUG - 21
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56