Accession
MI0011980
Description
Medicago truncatula
mtr-MIR2652j precursor miRNA
Sequence
10666
reads,
114.0
reads per million, 111 experiments
agcaugguuuuuuuuguugagaaaauccuuaugcacucugcauaaauccAGAAAUGGUUUUGGAGUACAAuucagaaaccauuuccacagcaaaaugguuuugauauaauuuuaugcagggugcuguaaacuauuaaguacaucuaaugauuuugaaauacaacucacaaaaaucauuucuggauuUAUGCAGGGUGCAUAAGGAUUuccuuaugcaaaaccgcgc
.((.((((((....(((((((.((((((((((((((((((((((((((((((((((((((((((((....((((((((((((((........))))))))))............(((((....))))).(((....)))..(((....)))..)))).....)))).).))))))))))))))))))))))))))))))))))))))).)))).))))))))).))
.((.((((((....(((((((.((((((((((((((((((((((((((((((((((((((((((((....((((((((((((((........))))))))))............(((((....))))).(((....)))..(((....)))..)))).....)))).).))))))))))))))))))))))))))))))))))))))).)))).))))))))).))
Structure
a a uuuu - a - - -ACAA --------------------------------------------------- cca gc ugguuu ugu ugag aaauccuuaugcacucugcauaaauccAGAAAUGGUUUU G GAGU uuca gaaaccauuu c || |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| | |||| |||| |||||||||| cg gccaaa acg auuc uUUAGGAAUACGUGGGACGUAUuuaggucuuuacuaaaa c cuca aagu uuuugguaaa a - c ---- u c a a acaua uuuaguaaucuacaugaauuaucaaaugucgugggacguauuuuaauauag acg
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr8: 17937327-17937552 [-]
Database links
Mature mtr-miR2652j-5p
| Accession | MIMAT0054945 |
| Description | Medicago truncatula mtr-miR2652j-5p mature miRNA |
| Sequence | 50 - AGAAAUGGUUUUGGAGUACAA - 70 |
| Evidence |
experimental
unknown |
Mature mtr-miR2652j-3p
| Accession | MIMAT0013433 |
| Description | Medicago truncatula mtr-miR2652j-3p mature miRNA |
| Sequence | 187 - UAUGCAGGGUGCAUAAGGAUU - 207 |
| Evidence |
experimental
454 [1] |
References
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