miRBase entry: mtr-MIR2632b

Dead hairpin entry

Stem-loop mtr-MIR2632b


Accession
MI0011944
Description
Medicago truncatula mtr-MIR2632b precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

15130 reads, 162.0 reads per million, 111 experiments
aagucauuugaauuuucaucccugaAGUUACUAAUCCUUCCAAUCUGCCccugcaaauauuaaucauuugacuuuugguaaugacagcccaccucagcaaaaaaaccuaauuaugaccaaaaguuaaaugauuaauauuugcagggcagauuagAAGGAUUAGUAACUUCAGAGACGAaaauucaaaugaacua
.((((((((((((((((.((.(((((((((((((((((((.(((((((((.((((((((((((((((((((((((((((.((((..........................)))).))))))))))))))))))))))))))))))))))))).))))))))))))))))))).)).))))))))))))).))).

Structure
a   -             a  c                   C         c                            a    cagcccaccuca 
 agu cauuugaauuuuc uc cugaAGUUACUAAUCCUUC AAUCUGCCc ugcaaauauuaaucauuugacuuuuggu auga            g
 ||| ||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||             
 uca guaaacuuaaaAG AG GACUUCAAUGAUUAGGAAg uuagacggg acguuuauaauuaguaaauugaaaacca uauu            c
a   a             C  A                   a         -                            g    aauccaaaaaaa