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miRBase entry: mtr-MIR2629a
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Dead hairpin entry
Stem-loop
mtr-MIR2629a
Accession
MI0011910
Description
Medicago truncatula
mtr-MIR2629a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Sequence
31574
reads,
284.0
reads per million, 111 experiments
Show Histogram
Copy Sequence
caguUUUCCUCGGUAGUUAACUGCAGCUgguuccauaauucgGCAGUUAACUGCCGAGG
.......(((((((((((((((((..................)))))))))))))))))
Structure
caguUUU AGCUgguu CCUCGGUAGUUAACUGC c ||||||||||||||||| GGAGCCGUCAAUUGACG c ------- gcuuaaua