miRBase entry: mtr-MIR2617c

Dead hairpin entry

Stem-loop mtr-MIR2617c


Accession
MI0011882
Description
Medicago truncatula mtr-MIR2617c precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

2746 reads, 26.0 reads per million, 111 experiments
cuauuuaagaaauuuugaaaUGUAGUGUAGCAUGCCCGUUugugaauuacugaugaauauuuuauauuuAAUUACUUUUGGGUAACGGGGUGUuacauuugauggacaacuuaaguau
.((((((((.....(((..((..((((((((((.(((((((.((((.......(((((((...)))))))......)))).).))))))))))))))))..))...))))))))))).

Structure
c        aaauu   -aa  GU          G      - g    uuacuga       u 
 uauuuaag     uug   aU  AGUGUAGCAU CCCGUU u ugaa       ugaauau  
 ||||||||     |||   ||  |||||||||| |||||| | ||||       ||||||| u
 augaauuc     aac   ua  uuacauUGUG GGGCAA G GUUU       Auuuaua  
u        -----   agg  gu          -      U G    -UCAUUA       u