miRBase entry: mtr-MIR2614

Dead hairpin entry

Stem-loop mtr-MIR2614


Accession
MI0011875
Description
Medicago truncatula mtr-MIR2614 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

19885 reads, 162.0 reads per million, 111 experiments
uggaaaugaguggagucgaacCGAACCUGUCUGAGCUCGGCUCGAcuagauaagaauuuguucggcucaaaacucgacucgaguucgacacgaacuuuuuuucagcucgaauucgacuuguuuaaaguucacgaauaguuCGGUUCGACUCGUUAGGUUCa
((((..(((...((((((((((((((.((((.((((((((.((((((.(((((....))))).))........)))).)))))))))))).(((((((....(((.(((....))).)))...))))))).......)))))))))))))).)))..))))

Structure
    aa   gug              ----------------------------------------------C    U        C    --------  a     g 
ugga  uga   gagucgaacCGAAC                                               UGUC GAGCUCGG UCGA        cu gauaa a
||||  |||   ||||||||||||||                                               |||| |||||||| ||||        || |||||  
aCUU  AUU   CUCAGCUUGGCuug                                               acag cuugagcu agcu        gg uuguu a
    GG   --G              auaagcacuugaaauuuguucagcuuaagcucgacuuuuuuucaagc    -        c    caaaacuc  c     u