miRBase entry: mtr-MIR2602b

Dead hairpin entry

Stem-loop mtr-MIR2602b


Accession
MI0011853
Description
Medicago truncatula mtr-MIR2602b precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

11155 reads, 103.0 reads per million, 111 experiments
acugccacgucacUAAUUCGAUGACGUGGCAAUCACUAccacacaugaaauuccaauuuugcccuuaagaagaggacaaauauugaagaaagaauuggaaacucagggguaaaauuggaauuucauguaUGGCAGUGAUUGCCACGUCAUcaaauuagugacaugccag
.(((.((.((((((((((.((((((((((((((((((.(((.((((((((((((((((((((((((.....(((..(((...((.....))...)))....))))))))))))))))))))))))))).))).)))))))))))))))))).)))))))))).)).)))

Structure
a   c  c          C                  A   c                        aagaa   --ga   aua  g 
 cug ca gucacUAAUU GAUGACGUGGCAAUCACU cca acaugaaauuccaauuuugcccuu     gag    caa   uu a
 ||| || |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||     |||    |||   || a
 gac gu cagugauuaa cUACUGCACCGUUAGUGA GGU uguacuuuaagguuaaaaugggga     cuc    guu   aa g
-   c  a          a                  C   a                        -----   aaag   aag  a