miRBase entry: mtr-MIR2602a

Dead hairpin entry

Stem-loop mtr-MIR2602a


Accession
MI0011852
Description
Medicago truncatula mtr-MIR2602a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

12463 reads, 105.0 reads per million, 111 experiments
acugccacaucacuaauucgaugacguggcaaucacuaccacacaugaaauuccaauuuagcccuuaagaAGAGGACAAAAUAUUGAAGAAAGAauuggaaacccagggguaaaauuagaauuucauguaUGGCAGUGAUUGCCACGUCAUcaaauuagugacauagcag
.((((....(((((((((.((((((((((((((((((.(((.(((((((((((.(((((.(((((...........(((....)))..........(((....)))))))).))))).))))))))))).))).)))))))))))))))))).)))))))))....))))

Structure
a    caca         c                  a   c           c     a     ---------uaagaAGAGGA   A 
 cugc    ucacuaauu gaugacguggcaaucacu cca acaugaaauuc aauuu gcccu                    CAA A
 ||||    ||||||||| |||||||||||||||||| ||| ||||||||||| ||||| |||||                    |||  
 gacg    agugauuaa cUACUGCACCGUUAGUGA GGU uguacuuuaag uuaaa ugggg                    GUU U
-    auac         a                  C   a           a     a     acccaaagguuaAGAAAGAA   A