miRBase entry: mtr-MIR2594

Dead hairpin entry

Stem-loop mtr-MIR2594


Accession
MI0011830
Description
Medicago truncatula mtr-MIR2594 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

3240 reads, 31.0 reads per million, 106 experiments
ccgcuucucagugcugcuguaguucCUUCGGCGAUGUUGCUCACCAUGGCCAAGGAUGCCAGAGgcacuucuacuccgu
.........((((((.(((....(((((.(((.(((........))).))))))))...))).))))))..........

Structure
-ccgcuucuc      g   uagu     C   G   UUG 
          agugcu cug    ucCUU GGC AUG   C
          |||||| |||    ||||| ||| |||    
          ucacgG GAC    AGGAA CCG UAC   U
ugccucaucu      A   -CGU     -   G   CAC