miRBase entry: mtr-MIR2586a

Dead hairpin entry

Stem-loop mtr-MIR2586a


Accession
MI0011798
Description
Medicago truncatula mtr-MIR2586a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

42047 reads, 340.0 reads per million, 111 experiments
augacaaccuaugaAGCACGGAUACGGACACGGACACCggacacgacacagacacgccgacacaacuaauaauuugaaaauaucacauuaucugguguAAUUACAAGUGUCGGUGUCaugucgguaucggacacgacacguguccgacacugggacacgccuaauccgaggaguguccgugcuucauagaugacaa
........(((((((((((((((((...(.((((.((((.(((.(((((.(((((.........(((((((((.(((.....))).))))).))))..........))))).))))).))))))).(((((((((...)))))))))...((((.....)))).)))).)..))))))))))))))))).......

Structure
augacaac                 GGA A    --------------------------------------C    g   c     a     -gccgacaca    -     u   a 
        cuaugaAGCACGGAUAC   C CGGA                                       ACCg aca gacac gacac          acua auaau uga a
        |||||||||||||||||   | ||||                                       |||| ||| ||||| |||||          |||| ||||| ||| a
        gauacuucgugccugug   g gccu                                       uggc ugu CUGUG CUGUG          uggu uauua acu u
-aacagua                 -ag a    aauccgcacagggucacagccugugcacagcacaggcua    -   a     G     AACAUUAAug    c     c   a