Stem-loop bta-mir-2448

Accession

MI0011502

Description

Bos taurus bta-mir-2448 precursor miRNA

Literature search

2 open access papers mention bta-mir-2448
(2 sentences)

Sequence

114 reads, 16 reads per million, 27 experiments

ugcacCUGCGGAUACAACCAAACACGGuuggagaauauuucacaaucuGUGGUUGAUUGGAUCCGUGGGUgua
((((((((((((..(((.((..((((((((((((...)))).))).)))))..)).)))..))))))))))))

Structure

            UA   C  AA     -   -    a 
ugcacCUGCGGA  CAA CA  CACGG uug gaga  
||||||||||||  ||| ||  ||||| ||| |||| u
augUGGGUGCCU  GUU GU  GUGuc aac cuuu  
            AG   A  UG     u   a    a 

Annotation confidence High

Genome context

chr6: 116014595-116014667 [-]

Mature bta-miR-2448-5p

• Accession: MIMAT0012025
• Description: Bos taurus bta-miR-2448-5p mature miRNA
• Sequence: 6 - CUGCGGAUACAACCAAACACGG - 27
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2448-3p

• Accession: MIMAT0012026
• Description: Bos taurus bta-miR-2448-3p mature miRNA
• Sequence: 49 - GUGGUUGAUUGGAUCCGUGGGU - 70
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026