Stem-loop bta-mir-2425

Accession

MI0011475

Description

Bos taurus bta-mir-2425 precursor miRNA

Literature search

4 open access papers mention bta-mir-2425
(98 sentences)

Sequence

1602 reads, 1.0 reads per million, 197 experiments

aggcauugagggaCCAGGGCACGGAUCCAUGAACUaggcuacuuaccacgUUCGUAGACCCUGCCCUCCUCccuccagccu
((((...((((((..((((((.((.((.((((((..((.......))..)))))).)))).))))))..))))))..))))

Structure

    auu      CC      C  A  C      Ua  cu 
aggc   gaggga  AGGGCA GG UC AUGAAC  gg  a
||||   ||||||  |||||| || || ||||||  ||  c
uccg   cuccCU  UCCCGU CC AG UGCUUg  cc  u
    -ac      CC      C  -  A      ca  au 

Annotation confidence High

Genome context

5: 30082250-30082330 [+]

Mature bta-miR-2425-5p

• Accession: MIMAT0011994
• Description: Bos taurus bta-miR-2425-5p mature miRNA
• Sequence: 14 - CCAGGGCACGGAUCCAUGAACU - 35
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2425-3p

• Accession: MIMAT0011995
• Description: Bos taurus bta-miR-2425-3p mature miRNA
• Sequence: 51 - UUCGUAGACCCUGCCCUCCUC - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026