Stem-loop bta-mir-2419

Accession

MI0011467

Description

Bos taurus bta-mir-2419 precursor miRNA

Literature search

1 open access papers mention bta-mir-2419
(2 sentences)

Sequence

2773 reads, 60 reads per million, 74 experiments

ccucuaugAUCGCAUCAACACUCGUCUGUUcuuaaauaacauugagaaCAGGCGGGUGCUAAUACGAUCAuagagg
((((((((((((......(((((((((((((((((......)))))))))))))))))......))))))))))))

Structure

            CAUCAA                 au 
ccucuaugAUCG      CACUCGUCUGUUcuuaa  a
||||||||||||      |||||||||||||||||   
ggagauACUAGC      GUGGGCGGACaagaguu  a
            AUAAUC                 ac 

Annotation confidence Not enough data

Genome context

chr4: 66580841-66580916 [-]

Mature bta-miR-2419-5p

• Accession: MIMAT0011985
• Description: Bos taurus bta-miR-2419-5p mature miRNA
• Sequence: 9 - AUCGCAUCAACACUCGUCUGUU - 30
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2419-3p

• Accession: MIMAT0011986
• Description: Bos taurus bta-miR-2419-3p mature miRNA
• Sequence: 49 - CAGGCGGGUGCUAAUACGAUCA - 70
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026